Browse of TCMCG015C04361 protein

CDS

Accession Number	TCMCG015C04361
gbkey	CDS
Protein Id	XP_027084368.1
Location	complement(join(38821392..38821514,38821722..38821820,38822132..38822203,38822305..38822398,38822832..38823032,38823143..38823421,38823918..38824030,38824107..38824206,38824296..38824418,38824752..38824819,38825097..38825252,38825473..38825619,38825748..38826017,38826096..38826180,38826289..38826440,38826558..38826707,38826807..38826860,38827074..38827203,38827316..38827449,38827722..38828336))
Gene	LOC113706633
GeneID	113706633
Organism	Coffea arabica

Protein

Length	1054aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027228567.1
Definition	DNA repair protein RAD5A-like isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	KL
Description	Prokaryotic RING finger family 4
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K15505        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000724        [VIEW IN EMBL-EBI] GO:0000725        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009292        [VIEW IN EMBL-EBI] GO:0009294        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044764        [VIEW IN EMBL-EBI] GO:0045003        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGGTATTAGTAAAGTTACCGATGAATTGGTTTTGATGGTTCGATCCATCGTAGGCGCTGAATACTCAAATATGGATATAGTTCGAGCCCTGCACATGGCCAAGAATGATCCCACGGCTGCAATTAACATCATTTTTGACACTCCCGGTTTTAGAAAACCTGAAATTCCCAAAAAACCCGAGCCTTTGAATCGAAATTTGAGCCCCGAGCCGGCAACTGTGGCAAATCCCAGTGTGAATGGTACTGACGATCATGATAGCAAGGCCAAGAATCAGAATTTGTGTCGGGTTTCGGCTTCAAATGGGGCTGTAAAGGCTAGGATAGAGGATAGTGAGAGAGAGAGGAAAGTTGAGGATGCGAGGTGTTCGAGCTCCAATGGGTGTTCGAGTTCGAGTTCAATGGGGAGTGAATGGTGGCTCGTGGGGTGTGGTGAGGTTGCAGGGATTTCGACGTGTAAAGGAAGGACTCTGAAGCCTGGGGAGGAGGTTTTTTTCACATTTCCGGTGGAGAGAAAGTTGAGTTCACCTTCTCCTGGAAAGTCTGGGGGTGGTCGGGGGCGGCAGGTGTCTTCTTCTTCTGAAATTGTCAGATTTTCCACGAATGCTTGTGGAGAGATTGGCCGCATCCCATATGAATGGGCTCGATGCTTATTACCACTTGTGAGGGACAAGAAAGTTAGAATTGATGGGCATTGTAAATCCGCTCCACCTGTATTAGGAATTATGGACAGCATTATTCTGTCCGTCAGCGTGTATATAAACGGTTCCATGTTCCAAAAGAGCCATCAGGCTTCACTGAAAGCAGCCTCAAATGATGAATCAGTTATTCATCCTCTGCCAACGCTTTTCCAATTGCTGGGGCTCTCTCCTTTTCAGAAGGCAGAATTCACTCCAGGCGATTTGTATACGAAGAAGCGTCCGTTGAACTTAGAGGACAGCTTTAATGTCTCTGCACCATTGTTTCCTATTCCTAAATTCAAGAGCCAATCAACTCTAGATGGAAGTAAGATGGAAAATGAGGAGTCAATATCTGACAATGATCTTGACAAAATTGTTGGTGTTGCAGACAACTCTGAATTACTGGAAATGGAACCTCCAAGTACTCTTCAGTGTGAACTTCATCCATATCAGAAGCAGGCTCTTCATTGGATGATTCAACTTGAGAGGGGCCATTGCCTGGATGAAGCAGCATCAACGTTGCACCCATGTTGGGATGCGTACCGGCTTGCAGACAAAAGGGGGCTTGTTATATACTTGAATGCATTTTCTGGCGATGCAACAACAGAATTTCCAAGCACTCTTCGGATGGCCAGAGGAGGAATTCTGGCAGATTCTATGGGGCTTGGGAAAACTATCATGACCATAGCTCTTCTTCTAACACATTCTGAAAGAGGTGGTTCATTAGGAAACCAATTGACAGCCCAGACTTTGACTGGAAATGGTGAAGCTAGCCTTATTTCAGATCAATCTCCAACGGCAAAAAAAGCGGCAAAAATTTCTGGATTCGAAAAGCTTTTGAAGCCAAAAAACTTTCTCACATGTGGTGGAAACCTTATTATCTGTCCAATGACCCTTATAGGTCAGTGGAAGGCAGAAATTGAAACCCATGCACAACCTGGGACTTTGTCGATTTACATTCACTATGGGCAGAACAGATCAAGGGATGCACTCGTTCTAGGCCAAAGTGATGTTGTGCTCACAACTTATGGAGTTTTAGCCTCAGAGTTCTCAGCAGAGAATGCTGATGTCACTGGGGGACTCTTCTCAGTGAGATGGTTTAGAGTGGTGCTAGACGAAGCACACACAATAAAGTCTTCAAAAAGCCAAATTTCCATGGCTGCAGCTGCGCTTGTTGCTGATCGTCGATGGTGCCTTACTGGCACCCCTATCCAGAACAACCTAGAAGATCTTTACAGTCTTCTTCGATTTTTGAAGGTGGAACCATGGGGAAGCTGGGCATGGTGGAACAAACTTGTTCAGAAACCTTTTGAGGAGGGTGATGCGCGTAGTTTGAAGTTGGTCCAATCAATATTAAAGCCAATTATGCTAAGAAGAACTAAATCTAGTACTGACAAGGAAGGCAGGCCAATTTTGGTTCTTCCACCTGCTGATATTCAAGTGATATATTGTGAACTTACAGAAGCAGAGAGGGATTTTTATGATGCTTTGTTTAAAAGATCAAAGGTGAAATTTGATAAATTTGTCGAGCAAGGACGTGTTCTTCACAATTATGCTTCAATATTGGAGTTGCTCTTGCGTCTTCGTCAATGTTGTGACCATCCATTTTTAGTGATGAGTCGGGGCGACACGCAAGAGTTCTCTGATCTGAATAAGCTCACAAGACGCTTTCTTAAGGTTGGTCAGGACATTGTGGATGGGCAAGCTAGAGATGTACCATCACTGGCTTATGTTGAGGAGGTTGTTGAAGAGTTACGAAAAGGGGAAGTAGGAGAGTGCCCGATATGCCTTGAAGCTTTTGAAGATGCTGTATTGACACCATGTGCTCATAGACTATGCAGAGAATGCCTCTTAGCAAGTTGGCGAAGCTCTACTTCTGGTTTTTGTCCTGTTTGTAGAAAGATGATTACCAAGCAAGAACTTCTCACAGCTCCTACTCAGAGTCGCTTCCGGATTGATATTGAGAGAAATTGGGTCGAATCATCTAAGGTTTCTGCTCTTTTGCATGAACTTGAAATTCTTCGCTTAGCAGGGTCCAAGAGCATTGTTTTCAGCCAGTGGACTGCCTTTCTTGATCTATTGCAGATTGCTCTTTCTCGGAGTGATATTCAATTTCTTCGTCTGGATGGGACCCTTAACCAGCAACAACGTGAGAATGTAATAAAGCAATTCTCAGAGGAAGATAACATCATGGTTTTGCTAATGTCATTGAAGGCTGGGGGAGTTGGGATCAACTTAACAGCTGCATCCAACGCTTTTGTCTTGGATCCCTGGTGGAACCCAGCCGTAGAGGAACAAGCTGTAATGCGCATTCATCGCATTGGACAAACTGAAAAAGTAATGATCAAAAGGTTCATCATGAAGGGAACCGTAGAAGAAAAAATGGAAGCAGTGCAAGCACGCAAACAACGGATGATTTCTGGTGCTTTGACTGACCAAGAAGTTAGATCAGCGCGCATCGAGGAGCTTAAGATGCTTTTCGCTTAA

Protein:   MGISKVTDELVLMVRSIVGAEYSNMDIVRALHMAKNDPTAAINIIFDTPGFRKPEIPKKPEPLNRNLSPEPATVANPSVNGTDDHDSKAKNQNLCRVSASNGAVKARIEDSERERKVEDARCSSSNGCSSSSSMGSEWWLVGCGEVAGISTCKGRTLKPGEEVFFTFPVERKLSSPSPGKSGGGRGRQVSSSSEIVRFSTNACGEIGRIPYEWARCLLPLVRDKKVRIDGHCKSAPPVLGIMDSIILSVSVYINGSMFQKSHQASLKAASNDESVIHPLPTLFQLLGLSPFQKAEFTPGDLYTKKRPLNLEDSFNVSAPLFPIPKFKSQSTLDGSKMENEESISDNDLDKIVGVADNSELLEMEPPSTLQCELHPYQKQALHWMIQLERGHCLDEAASTLHPCWDAYRLADKRGLVIYLNAFSGDATTEFPSTLRMARGGILADSMGLGKTIMTIALLLTHSERGGSLGNQLTAQTLTGNGEASLISDQSPTAKKAAKISGFEKLLKPKNFLTCGGNLIICPMTLIGQWKAEIETHAQPGTLSIYIHYGQNRSRDALVLGQSDVVLTTYGVLASEFSAENADVTGGLFSVRWFRVVLDEAHTIKSSKSQISMAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLKVEPWGSWAWWNKLVQKPFEEGDARSLKLVQSILKPIMLRRTKSSTDKEGRPILVLPPADIQVIYCELTEAERDFYDALFKRSKVKFDKFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLTRRFLKVGQDIVDGQARDVPSLAYVEEVVEELRKGEVGECPICLEAFEDAVLTPCAHRLCRECLLASWRSSTSGFCPVCRKMITKQELLTAPTQSRFRIDIERNWVESSKVSALLHELEILRLAGSKSIVFSQWTAFLDLLQIALSRSDIQFLRLDGTLNQQQRENVIKQFSEEDNIMVLLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTEKVMIKRFIMKGTVEEKMEAVQARKQRMISGALTDQEVRSARIEELKMLFA